Applied Statistics in Agricultural, Biological, and Environmental Sciences - Additional Appendices

Appendix A1.

Appendix A2. Author Online Supplements

Chapter 2. Analysis of Variance and Hypothesis Testing

• Ch2_McIntosh_SASOutput_pHCaPctTotal.mht
• Ch2_McIntosh_SASOutput_statbeanpHCa_wcontrasts.mht
• Statbean_Data.xlsx
• statbean.sas7bdat

Chapter 6. Linear Regression Techniques

• Ch6_Richter_Example_Data.xls
• potato.xls

Chapter 7. Analysis and Interpretation of Interactions of Fixed and Random Effects

• Ch7_Vargasetal_Appendix_example1.sas
• Ch7_Vargasetal_Appendix_example2.sas
• Ch7_Vargasetal_Appendix_example3.sas
• Ch7_Vargasetal_FixRnd2_example.sas
• Ch7_Vargasetal_FixRnd10_example.sas
• Experiment_1_Data_Wheat.csv
• FixRnd2.csv
• FixRnd10.csv

Chapter 8. The Analysis of Combined Experiments

• antigua.csv
• antigua.r
• antigua.sas
• Ch8_Dixon_exercise1.sas
• Ch8_Dixon_exercise2.sas
• oats.csv
• oats.r
• oats.sas
• onfarm.csv
• Prate.csv
• trigly.r
• trigly.sas
• triglybook.txt

Chapter 9. Analysis of Covariance

• Ch9_McCarter_ANCOVA_analyses_for_all_datasets.sas

Chapter 10. Analysis of Repeated Measures for the Biological and Agricultural Sciences

• HEIGHT.txt

Chapter 11. The Design and Analysis of Long-term Rotation Experiments

• Ch11_Payne_Potato_Appendix1.gen
• Ch11_Payne_Potato_Appendix3.r
• Ch11_Payne_Potato_Appendix5.sas
• Ch11_Payne_Sugar.gen
• Ch11_Payne_Sugar_Exercise.sas
• wmpotato.rda
• wmpotato.xlsx
• wmsugar.rda
• wmsugar.xlsx

Chapter 12. Spatial Analysis of Field Experiments

• Ch12_Burgueno_Example1.sas
• Ch12_Burgueno_Example2.sas
• Maize_Ch12_Example2.csv
• TMPdata_Ch12_Example1.csv

Chapter 13. Augmented Designs - Experimental Designs in which All Treatments are Not Replicated

• Ch13_Burguenoetal_Example1.sas

Chapter 14. Multivariate Methods for Agricultural Research

• mvYCdata.csv

Chapter 16. Analysis of Non-Gaussian Data

• Ch16_Stroup_AllData_Examples.sas
• ctr_pivot_strip_plot.csv
• RCBD_binomial.csv
• RptM_counts.csv
• Variety_trial.csv

Appendix B. Genstat Code

Translation by Vanessa Cave

Table of Contents

Chapter 1. Errors in Statistical Decision-Making - B2

Chapter 2. Analysis of Variance and Hypothesis Testing - B27

Chapter 3. Blocking Principles for Biological Experiments - B74

Chapter 4. Power and Replication – Designing Powerful Experiments - B97

Chapter 5. Multiple Comparison Procedures: The Ins and Outs - B106

Chapter 6. Linear Regression Techniques - B120

Chapter 7. Analysis and Interpretation of Interactions of Fixed and Random Effects - B249

Chapter 8. The Analysis of Combined Experiments - B306

Chapter 9. Analysis of Covariance - B379

Chapter 12. Spatial Analysis of Field Experiments - B413

Chapter 13. Augmented Designs - Experimental Designs in which All Treatments are Not Replicated - B455

Chapter 14. Multivariate Methods for Agricultural Research - B478

Chapter 15. Nonlinear Regression Models and Applications - B493

Appendix C. R Code

Translation by Jon Baldock and Kimberly Garland-Campbell

Figures for Appendix C. R Code

Table of Contents

Chapter 2. Analysis of Variance and Hypothesis Testing - C2

• Ch. 2 Figures

Chapter 3. Blocking Principles for Biological Experiments - C31

• Ch. 3 Figures

Chapter 4. Power and Replication – Designing Powerful Experiments - C44

• Ch. 4 Figures

Chapter 6. Linear Regression Techniques - C58

• Ch. 6 Figures

Chapter 7. Analysis and Interpretation of Interactions of Fixed and Random Effects - C166

• Ch. 7 Figures

Chapter 9. Analysis of Covariance - C190

• Ch. 9 Figures

Chapter 12. Spatial Analysis of Field Experiments - C200

Chapter 13. Augmented Designs – Experimental Designs in which All Treatments are Not Replicated - C213

• Ch. 14 Figures